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species [2015/12/18 17:02] mhidalgospecies [2017/05/24 14:33] (current) – external edit 127.0.0.1
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   * Mouse (Mus musculus)   * Mouse (Mus musculus)
   * Rat (Rattus norvegicus)   * Rat (Rattus norvegicus)
- +  Zebrafish (Danio rerio) 
-When a **VCF file has been selected**, only Human species can be selected. Also, we need to specify some further parameters: +  * Fruit fly (Drosophila melanogaster) 
-  * Reference genome: Select either reference genome GRCh37 or GRCh38 +  * Worm (Caenorhabditis elegans)
-  * Inheritance pattern: Select the kind of inheritance pattern, either recessive or dominant. +
-  * Compound hetero: Select if heterozygote compounds must be considered. +
-  * SIFT, PolyPhen, PhastCons: Select which tools must be used on order to infer the impact of the mutations in the expression profile. At least one must be selected. +
- +
species.1450458177.txt.gz · Last modified: 2017/05/24 14:33 (external edit)