Differences

This shows you the differences between two versions of the page.

--- filling_in_a_tool_form [2015/12/18 15:23] – created mhidalgo
+++ filling_in_a_tool_form [2017/05/24 14:33] (current) – external edit 127.0.0.1
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 The main page of a pathway tool is its filling in form. This form includes all the information and parameters that the tool needs to process a job. The form is divided in different panels:
-  * Input data
-  * Design data
-  * Species
-  * Parameters
-  * Pathways
-  * Job information
-==== Input data ====
-In the input data panel, we must introduce the expression data and, optionally, the variant data.
-The **expression data** can be either an:
-  * Expression matrix provided by yourself (see how to upload files in [[upload_your_data|Upload your data]]), or
-  * Expression vector taken from an expression database. In this case, we must choose the tissue database and tissue names.
-The **variant data** must be a VCF file.
-==== Design data ====
-The design data panel allows you to choose the kind of experiment you want to perform. You can choose between two main experimental designs:
-  * **Two group comparison**:
-  * **Correlation with continuous variable**:
 ===== Launching a job =====