Differences

This shows you the differences between two versions of the page.

--- design_data [2015/12/18 16:44] – mhidalgo
+++ design_data [2017/05/24 14:33] (current) – external edit 127.0.0.1
@@ Line 3: / Line 3: @@
 ===== Design data panel =====
-The design data panel allows you to choose the kind of experiment you want to perform. You can choose between three main experimental designs:
+The design data panel allows you to choose groups which you want to compare.
+The [[experimental_design_file_format | experimental design file]] must include two columns: the first one with the names of the samples, the second one with the class to which each sample belongs.
-  * **Two group comparison**: The comparison is performed between the two groups described in the experimental design file. The experimental design file must include two columns: the first one with the names of the samples, the second one with the class to which each sample belongs.
+See how to upload files in [[upload_your_data|Upload your data]].
-  * **Correlation with continuous variable**: A correlation is performed between the values of each path along the samples and the continuous variable introduced. The experimental design file must include two columns: the first one with the names of the samples, the second one with the value of the variable for each one of the samples.
-  * **Mutation effect**: The comparison is performed between the expression matrix without considering the mutations, and the expression matrix resulting from integrating the information about the mutations. No experimental design file is needed.